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@ga4gh

Global Alliance for Genomics and Health

An international coalition, formed to enable the sharing of genomic and clinical data.

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  1. ga4gh-schemas ga4gh-schemas Public archive

    Models and APIs for Genomic data. RETIRED 2018-01-24

    Python 220 112

  2. benchmarking-tools benchmarking-tools Public

    Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls

    HTML 208 46

  3. ga4gh-server ga4gh-server Public archive

    Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24

    Python 99 91

  4. vrs vrs Public

    Extensible specification for representing and uniquely identifying biological sequence variation

    Jupyter Notebook 96 38

  5. phenopacket-schema phenopacket-schema Public

    Repository for the GA4GH phenopacket schema

    Java 96 31

  6. task-execution-schemas task-execution-schemas Public

    93 30

Repositories

Showing 10 of 142 repositories
  • GA4GH-RegBot Public
    ga4gh/GA4GH-RegBot’s past year of commit activity
    Python 4 MIT 3 0 2 Updated Mar 3, 2026
  • 2025-catvar-call-to-action Public
    ga4gh/2025-catvar-call-to-action’s past year of commit activity
    Jupyter Notebook 1 Apache-2.0 0 1 0 Updated Feb 27, 2026
  • analytics-dashboard Public

    Embedded analytics dashboard on GA4GH metrics

    ga4gh/analytics-dashboard’s past year of commit activity
    Jupyter Notebook 1 0 9 5 Updated Feb 26, 2026
  • tool-registry-service-schemas Public

    APIs for discovering genomics tools, their metadata and their containers

    ga4gh/tool-registry-service-schemas’s past year of commit activity
    Shell 34 Apache-2.0 18 28 (2 issues need help) 3 Updated Feb 26, 2026
  • va-spec Public

    An information model for representing variant annotations.

    ga4gh/va-spec’s past year of commit activity
    Jupyter Notebook 27 Apache-2.0 6 113 (1 issue needs help) 6 Updated Feb 26, 2026
  • vrs Public

    Extensible specification for representing and uniquely identifying biological sequence variation

    ga4gh/vrs’s past year of commit activity
    Jupyter Notebook 96 Apache-2.0 38 32 (2 issues need help) 2 Updated Feb 25, 2026
  • quality-control-wgs Public

    GA4GH Quality Control of Whole Genome Sequencing's metrics definition, benchmark resources and reference implementations

    ga4gh/quality-control-wgs’s past year of commit activity
    Jupyter Notebook 21 Apache-2.0 6 5 1 Updated Feb 25, 2026
  • task-execution-schemas Public
    ga4gh/task-execution-schemas’s past year of commit activity
    93 Apache-2.0 30 46 8 Updated Feb 25, 2026
  • va-spec-python Public

    GA4GH Variation Annotation Python Implementation

    ga4gh/va-spec-python’s past year of commit activity
    Python 2 Apache-2.0 1 4 3 Updated Feb 25, 2026
  • cat-vrs-python Public

    GA4GH Categorical Variation Representation Python Implementation

    ga4gh/cat-vrs-python’s past year of commit activity
    Python 2 Apache-2.0 4 3 0 Updated Feb 25, 2026
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